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Rubus spectabilis
Herbarium Datasets for Download:

The following downloads provide access to entire datasets from individual herbaria, and to the entire Consortium database. These datasets are intended for those performing large-scale data harvesting or analyses.

Data Formats:

Each dataset is formatted as a ZIP archive containing multiple tab-delimited text files in a simple relational structure. Files listed under the "DwC Archive" column follow the Darwin Core Archive (DwCA) specifications for field names. Files listed under the "Native Format" column have fields names matching the structure of the underlying Consortium database, and include additional fields that cannot be easily represented by DwCA.

Each dataset contains a text file called "occurrences.txt" (Native) or "occurrence.txt" (DwCA) holding one record per specimen with all core specimen fields (herbarium info, current identification, collector info, dates, location, notes, etc.). Each occurrence record is uniquely identified within the PNW Herbaria database by a field called OccurrenceID (Native) or id (DwCA).

Each dataset contains a text file called "annotations.txt" (Native) or "identifications.txt" (DwCA) that holds annotations/identifications. There may be multiple annotations/identifications linked to a single specimen record, using the OccurrenceID field (Native) or coreid field (DwCA; coreid = id in occurrence.txt).

Each dataset contains a text file called "media.txt" (Native) or "multimedia.txt" (DwCA) that holds metadata for images and other media associated with each specimen. There may be multiple images linked to a single specimen, again using OccurrenceID (Native) or coreid (DwCA). The image files themselves are stored on our server and can be access via the URLs defined in media.txt and multimedia.txt. The Native format media.txt file provides direcct links to three image formats provided by PNW Herbaria: a thumbnail image, a full-resolution JPEG image, and an online image viewer allowing zoom and pan capabilities. The DwCA format only provides links to the full-resolution JPEG images; however, programmers may readily modify these links to reccreate the links to the thumbnails or online image viewer.

Native format dataset files contain a fourth file, called "types.txt" containing scientific names (basionyms), type designations, and other relevant info for nomenclatural type specimens. There may be multiple type names associated with each occurrence record, each linked to a record in occurrences.txt by the OccurrenceID field.

DwCA format dataset files also contain two XML files with dataset metadata. The file "meta.xml" contains ordered lists of field names within each of the enclosed text files. The file "eml.xml" contains general metadata about the dataset as a whole, including provider and collection information, contact information, and license terms.

All text files are encoded as unicode (UTF-8) text, with Windows-style line endings (CR+LF) and fields separated by tabs. Field names and values are not enclosed in quotes.

Data Usage Policy:

Use of these datasets requires agreement to the terms and conditions in our Data Usage Policy.

Sensitive data (e.g., localities for rare taxa) are omitted from these datasets. Copies of these files with restricted data intact can be accessed by logging in. Some records in our database are not available for public release; such records are excluded from the datasets and record counts below.


Herbarium Collection # Specimens # Images DwC Archive Native Format Last Updated
ACFS Vascular Plants 0 0 DwCA (0 MB) Native (0 MB) 2022-04-17
ALA Cryptogams 76,008 71,382 DwCA (11.4 MB) Native (9.5 MB) 2024-02-28
ALA Vascular Plants 83,155 77,000 DwCA (11.1 MB) Native (9 MB) 2024-02-28
BABY Vascular Plants 10,886 2,731 DwCA (1.9 MB) Native (1.8 MB) 2024-02-28
BBLM Vascular Plants 5,614 6,422 DwCA (1.2 MB) Native (1.1 MB) 2024-11-21
BLMMD Bryophytes 1,323 25 DwCA (0.2 MB) Native (0.1 MB) 2024-11-21
BLMMD Fungi 4 0 DwCA (0.1 MB) Native (0.1 MB) 2024-11-21
BLMMD Lichens 821 6 DwCA (0.1 MB) Native (0.1 MB) 2024-11-21
BLMMD Vascular Plants 3,335 3,250 DwCA (0.6 MB) Native (0.6 MB) 2024-11-21
BOIS Vascular Plants 13,343 9,577 DwCA (2.2 MB) Native (2.1 MB) 2024-11-21
CIC Vascular Plants 59,664 60,325 DwCA (13.3 MB) Native (12.6 MB) 2024-11-21
COCC Vascular Plants 6,861 6,838 DwCA (1.2 MB) Native (1.1 MB) 2024-11-21
CRMO Vascular Plants 3,257 3,854 DwCA (0.8 MB) Native (0.7 MB) 2024-11-21
EVE Vascular Plants 485 300 DwCA (0.1 MB) Native (0.1 MB) 2024-11-21
EWU Vascular Plants 10,375 9,595 DwCA (2 MB) Native (1.9 MB) 2024-11-21
FHL Algae 3,920 4,115 DwCA (0.7 MB) Native (0.6 MB) 2024-11-21
GNWTYEL Vascular Plants 0 0 DwCA (0 MB) Native (0 MB) 2022-04-17
HAH Vascular Plants 2,665 0 DwCA (0.3 MB) Native (0.3 MB) 2021-06-17
HJAEF Vascular Plants 1,316 1,193 DwCA (0.3 MB) Native (0.2 MB) 2024-11-21
HPSU Bryophytes 4,466 7 DwCA (0.8 MB) Native (0.7 MB) 2024-11-21
HPSU Lichens 638 3 DwCA (0.1 MB) Native (0.1 MB) 2024-11-21
HPSU Vascular Plants 20,910 19,823 DwCA (4.5 MB) Native (4.3 MB) 2024-11-21
HSC Vascular Plants 1,625 0 DwCA (0.2 MB) Native (0.2 MB) 2024-02-28
ID Bryophytes 3,501 0 DwCA (0.5 MB) Native (0.5 MB) 2024-11-21
ID Fungi 6,610 0 DwCA (0.8 MB) Native (0.7 MB) 2024-11-21
ID Vascular Plants 193,730 188,723 DwCA (43.7 MB) Native (41.8 MB) 2024-11-21
IDE Vascular Plants 8,427 8,273 DwCA (1.4 MB) Native (1.4 MB) 2024-11-21
IDS Lichens 547 971 DwCA (0.1 MB) Native (0.1 MB) 2024-11-21
IDS Vascular Plants 75,051 73,912 DwCA (16.2 MB) Native (15.2 MB) 2024-11-21
LEA Vascular Plants 21,640 21,640 DwCA (2.4 MB) Native (2.3 MB) 2024-02-28
LINF Vascular Plants 4,421 4,294 DwCA (0.8 MB) Native (0.7 MB) 2024-11-21
MONT Vascular Plants 53,873 54,475 DwCA (9.7 MB) Native (9.3 MB) 2024-11-21
MONTU Vascular Plants 78,274 73,604 DwCA (23.1 MB) Native (21.6 MB) 2024-11-21
MORA Vascular Plants 6,206 278 DwCA (0.8 MB) Native (0.8 MB) 2024-11-21
NEZ Vascular Plants 1,329 1,202 DwCA (0.3 MB) Native (0.3 MB) 2024-11-21
NOCA Vascular Plants 8,614 8,369 DwCA (1.1 MB) Native (1 MB) 2024-02-28
NY Algae 99 0 DwCA (0.1 MB) Native (0.1 MB) 2024-02-12
NY Bryophytes 58,109 0 DwCA (5.4 MB) Native (5 MB) 2024-02-12
NY Fungi 3,437 0 DwCA (0.4 MB) Native (0.4 MB) 2024-02-12
NY Lichens 597 0 DwCA (0.1 MB) Native (0.1 MB) 2024-02-12
NY Vascular Plants 29,237 0 DwCA (3.8 MB) Native (3.5 MB) 2024-02-12
OLYM Vascular Plants 7,708 0 DwCA (1 MB) Native (1 MB) 2024-11-21
OSC Algae 18,081 18,191 DwCA (3 MB) Native (2.8 MB) 2024-11-21
OSC Bryophytes 22,198 10,233 DwCA (4.9 MB) Native (4.7 MB) 2024-11-21
OSC Fungi 39,953 0 DwCA (3.5 MB) Native (3.3 MB) 2024-02-12
OSC Lichens 5,197 0 DwCA (0.6 MB) Native (0.5 MB) 2024-02-12
OSC USFS Lichens 131,322 131,403 DwCA (17.8 MB) Native (17.5 MB) 2024-11-21
OSC Vascular Plants 215,306 93,282 DwCA (52.4 MB) Native (50.5 MB) 2024-11-21
PCFC Vascular Plants 0 0 DwCA (0 MB) Native (0 MB) 2022-04-17
PCFS Vascular Plants 0 0 DwCA (0 MB) Native (0 MB) 2022-04-17
PLU Vascular Plants 8,758 8,788 DwCA (1.3 MB) Native (1.2 MB) 2024-11-21
PSM Vascular Plants 14,246 13,587 DwCA (2.4 MB) Native (2.3 MB) 2024-11-21
REED Vascular Plants 7,400 6,854 DwCA (1.3 MB) Native (1.2 MB) 2024-11-21
RM Types Specimens 994 1,165 DwCA (0.1 MB) Native (0.1 MB) 2024-11-21
RM Vascular Plants 154,709 22,103 DwCA (4.1 MB) Native (4.3 MB) 2024-11-21
SAJH Vascular Plants 603 603 DwCA (0.1 MB) Native (0.1 MB) 2024-11-21
SBLM Vascular Plants 1,817 1,810 DwCA (0.4 MB) Native (0.4 MB) 2024-11-21
SEF Vascular Plants 887 903 DwCA (0.2 MB) Native (0.2 MB) 2024-11-21
SOC Vascular Plants 23,847 21,778 DwCA (5.2 MB) Native (5 MB) 2024-11-21
SRP Vascular Plants 98,368 104,885 DwCA (21.8 MB) Native (20.5 MB) 2024-11-21
TFBLM Vascular Plants 855 882 DwCA (0.2 MB) Native (0.2 MB) 2024-11-21
UAAH Vascular Plants 17,560 12,410 DwCA (3.1 MB) Native (3 MB) 2024-11-21
UBC Algae 79,913 1,447 DwCA (6.1 MB) Native (5.5 MB) 2024-11-21
UBC Bryophytes 167,849 0 DwCA (12.9 MB) Native (11.9 MB) 2024-02-28
UBC Fungi 34,867 947 DwCA (5.5 MB) Native (5.1 MB) 2024-11-21
UBC Lichens 41,996 0 DwCA (3.9 MB) Native (3.6 MB) 2024-02-28
UBC Vascular Plants 187,280 35,588 DwCA (24.6 MB) Native (22.3 MB) 2024-11-21
UVIC Vascular Plants 0 0 DwCA (0 MB) Native (0 MB) 2024-11-21
UWB Vascular Plants 905 880 DwCA (0.2 MB) Native (0.2 MB) 2024-11-21
V Vascular Plants 218,873 0 DwCA (17.8 MB) Native (16.3 MB) 2024-11-21
VALE Vascular Plants 6,152 6,291 DwCA (1.4 MB) Native (1.3 MB) 2024-11-21
VIU Lichens 330 0 DwCA (0.1 MB) Native (0.1 MB) 2024-11-21
WCW Vascular Plants 13,538 13,697 DwCA (2.5 MB) Native (2.4 MB) 2024-11-21
WS Bryophytes 12,698 6 DwCA (1.8 MB) Native (1.7 MB) 2024-11-21
WS Vascular Plants 209,335 28,848 DwCA (33.5 MB) Native (31.2 MB) 2024-11-21
WTU Algae 17,399 19,065 DwCA (3 MB) Native (2.9 MB) 2024-11-21
WTU Bryophytes 76,661 25,970 DwCA (12 MB) Native (11.2 MB) 2024-11-21
WTU Fungi 80,121 129,995 DwCA (15.1 MB) Native (15 MB) 2024-11-21
WTU Lichens 32,762 7,731 DwCA (5.4 MB) Native (5 MB) 2024-11-21
WTU Vascular Plants 255,089 109,314 DwCA (49.2 MB) Native (46.6 MB) 2024-11-21
WWB Fungi 0 0 DwCA (0 MB) Native (0 MB) 2024-11-21
WWB Lichens 1 1 DwCA (0.1 MB) Native (0.1 MB) 2024-11-21
WWB Vascular Plants 20,564 22,165 DwCA (3.6 MB) Native (3.4 MB) 2024-11-21
ENTIRE CONSORTIUM DATABASE 3,089,725 1,470,675 DwCA (449.5 MB) Native (424.4 MB) 2023-10-03